Escherichia coli strain ECCRA-119

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain ECCRA-119 is a Gram-negative, rod-shaped bacterium that typically occurs in pairs or as individual cells. This strain thrives optimally at a temperature of 37.0°C, which aligns with the physiological conditions of its host-associated habitat. As a facultative anaerobe, ECCRA-119 can metabolize in both the presence and absence of oxygen, allowing it to adapt to varying oxygen levels within its environment. The versatility in its oxygen requirement suggests that ECCRA-119 is well-suited to inhabit diverse niches within host organisms, where it may encounter fluctuating oxygen conditions. This adaptation may also enable it to play a role in the gut microbiome, contributing to the overall metabolic activities and interactions within microbial communities. Furthermore, the ability to exist as single cells or in pairs may provide advantages in colonization dynamics and nutrient uptake, potentially influencing its ecological interactions. Understanding these traits can shed light on the strain's functional role in host-associated environments, emphasizing the importance of E. coli strains in microbial ecology and host-microbe interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain ECCRA-119

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain ECCRA-119
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli strain ECCRA-119


Gene Summary

Adenine Count

12960 bp

Thymine Count

11667 bp

Guanine Count

11284 bp

Cytosine Count

10250 bp

Genome Length

46161 bp

Protein-coding Genes

61 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinC7235_RS27130Not Available+1 - 27610173.9
hypothetical proteinC7235_RS27135Not Available+273 - 55110485.7
dinq-like type i toxin dqlbC7235_RS28495Not Available+1356 - 14513418.51
dna-binding proteinC7235_RS27145Not Available-1703 - 221519342.4
tn3-like element is3000 family transposaseC7235_RS27150Not Available+2359 - 5376116154.0
is30 family transposaseC7235_RS27155Not Available+5653 - 659736380.1
is5-like element is5 family transposaseC7235_RS27165Not Available-6706 - 768637825.6
subclass b1 metallo-beta-lactamase ndm-5C7235_RS27170Not Available+7921 - 873328497.1
bleomycin binding protein ble-mblC7235_RS27175Not Available+8737 - 910213440.0
phosphoribosylanthranilate isomeraseC7235_RS27180Not Available+9107 - 974521487.8

Displaying genes 1 – 10 of 228 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites