Methylobacterium sp. DM1

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Methylobacteriaceae

Genus

Methylobacterium

Description

Methylobacterium sp. DM1 is characterized as a rod-shaped bacterium, which is a common morphology among many members of the Methylobacterium genus. This species possesses flagella, indicating that it is motile and capable of movement in its environment. Methylobacterium sp. DM1 has a unique genomic structure with two distinct replicons, which may contribute to its adaptability and functionality in various ecological niches. The presence of multiple replicons can facilitate diverse metabolic pathways and enhance genetic variation, potentially allowing the organism to thrive in different environments. The strain is documented with the accession numbers NZ_CP029173.1 and NZ_CP029174.1, which provide access to its genomic information for further research and analysis. Methylobacterium species are often associated with plant environments, where they can engage in beneficial interactions with their hosts. This ecological insight suggests that Methylobacterium sp. DM1 may play a role in promoting plant growth or health, potentially through mechanisms such as nitrogen fixation or by enhancing nutrient availability. These traits underline the importance of Methylobacterium sp. DM1 in agricultural or ecological contexts, where its motility and metabolic capabilities could contribute to soil health and plant interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyMethylobacteriaceae
GenusMethylobacterium
SpeciesMethylobacterium sp. DM1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Methylobacterium sp. DM1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methylobacterium sp. DM1 chromosome, complete genome.

Gene Summary

Adenine Count

899131 bp

Thymine Count

896403 bp

Guanine Count

1931018 bp

Cytosine Count

1937796 bp

Genome Length

5664348 bp

Protein-coding Genes

5241 genes

Non-Coding Genes

128 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pa0069 family radical sam proteinC0214_RS10325Not AvailablePositive2176309 - 217744542073.3
ribonuclease hiiC0214_RS10330Not AvailableNegative2177534 - 217818422870.7
glycosyltransferase family 4 proteinC0214_RS10335Not AvailableNegative2178270 - 217933438210.0
udp-2,3-diacylglucosamine diphosphataseC0214_RS10340Not AvailableNegative2179361 - 218017330711.7
aminotransferase class v-fold plp-dependent enzymeC0214_RS10345Not AvailablePositive2180836 - 218204443338.9
d-2-hydroxyacid dehydrogenaseC0214_RS10350Not AvailablePositive2182288 - 218323234298.5
nadp-dependent methylenetetrahydromethanopterin/ methylenetetrahydrofolate dehydrogenaseC0214_RS10355Not AvailablePositive2183440 - 218430629713.6
methenyltetrahydrofolate cyclohydrolaseC0214_RS10360Not AvailablePositive2184391 - 218501721722.1
malate--coa ligase subunit betaC0214_RS10365Not AvailablePositive2185464 - 218663642076.6
succinate--coa ligase subunit alphaC0214_RS10370Not AvailablePositive2186659 - 218754930562.1

Displaying genes 2131 – 2140 of 5604 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.