Methylobacterium sp. DM1

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Methylobacteriaceae

Genus

Methylobacterium

Description

Methylobacterium sp. DM1 is characterized as a rod-shaped bacterium, which is a common morphology among many members of the Methylobacterium genus. This species possesses flagella, indicating that it is motile and capable of movement in its environment. Methylobacterium sp. DM1 has a unique genomic structure with two distinct replicons, which may contribute to its adaptability and functionality in various ecological niches. The presence of multiple replicons can facilitate diverse metabolic pathways and enhance genetic variation, potentially allowing the organism to thrive in different environments. The strain is documented with the accession numbers NZ_CP029173.1 and NZ_CP029174.1, which provide access to its genomic information for further research and analysis. Methylobacterium species are often associated with plant environments, where they can engage in beneficial interactions with their hosts. This ecological insight suggests that Methylobacterium sp. DM1 may play a role in promoting plant growth or health, potentially through mechanisms such as nitrogen fixation or by enhancing nutrient availability. These traits underline the importance of Methylobacterium sp. DM1 in agricultural or ecological contexts, where its motility and metabolic capabilities could contribute to soil health and plant interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyMethylobacteriaceae
GenusMethylobacterium
SpeciesMethylobacterium sp. DM1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Methylobacterium sp. DM1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methylobacterium sp. DM1 chromosome, complete genome.

Gene Summary

Adenine Count

899131 bp

Thymine Count

896403 bp

Guanine Count

1931018 bp

Cytosine Count

1937796 bp

Genome Length

5664348 bp

Protein-coding Genes

5241 genes

Non-Coding Genes

128 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dihydrolipoyl dehydrogenaseC0214_RS09585Not AvailableNegative2012648 - 201405148803.7
duf4241 domain-containing proteinC0214_RS09590Not AvailableNegative2014048 - 201524142881.6
2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferaseC0214_RS09595Not AvailableNegative2015327 - 201664946425.5
2-oxoglutarate dehydrogenase e1 componentC0214_RS09600Not AvailableNegative2016733 - 2019723111479.0
succinate--coa ligase subunit alphaC0214_RS09605Not AvailableNegative2019936 - 202082029932.3
adp-forming succinate--coa ligase subunit betaC0214_RS09610Not AvailableNegative2020829 - 202202541723.4
malate dehydrogenaseC0214_RS09615Not AvailableNegative2022134 - 202309633587.7
tetr family transcriptional regulatorC0214_RS09620Not AvailableNegative2023449 - 202418026359.4
3-dehydroquinate synthaseC0214_RS09625Not AvailablePositive2024432 - 202617161671.3
23s rrna (adenine(2503)-c(2))-methyltransferase rlmnC0214_RS09630Not AvailablePositive2026280 - 202755746532.1

Displaying genes 1981 – 1990 of 5604 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.