Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DDQ68_RS04655 | Not Available | Negative | 1083114 - 1083551 | 16530.4 |
| glycosyltransferase family 4 protein | DDQ68_RS04660 | Not Available | Positive | 1083666 - 1084988 | 48034.1 |
| hypothetical protein | DDQ68_RS04665 | Not Available | Negative | 1084990 - 1086807 | 67474.5 |
| udp-n-acetylglucosamine 4,6-dehydratase (inverting) | DDQ68_RS04670 | Not Available | Positive | 1086870 - 1087889 | 37942.6 |
| udp-4-amino-4, 6-dideoxy-n-acetyl-beta-l-altrosamine transaminase | DDQ68_RS04675 | Not Available | Positive | 1087940 - 1089121 | 43192.3 |
| tylf/mycf/novp-related o-methyltransferase | DDQ68_RS04680 | Not Available | Positive | 1089232 - 1089915 | 25008.8 |
| hypothetical protein | DDQ68_RS04685 | Not Available | Positive | 1089987 - 1091591 | 60155.2 |
| pseudaminic acid biosynthesis-associated methylase | DDQ68_RS04690 | Not Available | Positive | 1091733 - 1092398 | 25794.6 |
| cytidylyltransferase domain-containing protein | DDQ68_RS04695 | Not Available | Positive | 1092398 - 1093132 | 26876.3 |
| udp-2,4-diacetamido-2,4, 6-trideoxy-beta-l-altropyranose hydrolase | DDQ68_RS04700 | Not Available | Positive | 1093136 - 1094659 | 54143.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
