Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recb family exonuclease | DDQ68_RS04470 | Not Available | Negative | 1027322 - 1028398 | 39082.2 |
| dead/deah box helicase | DDQ68_RS04475 | Not Available | Negative | 1028395 - 1034643 | 233005.0 |
| hypothetical protein | DDQ68_RS22540 | Not Available | Negative | 1034704 - 1037691 | 111719.0 |
| transglutaminase domain-containing protein | DDQ68_RS22545 | Not Available | Positive | 1038384 - 1039112 | 26676.7 |
| hypothetical protein | DDQ68_RS04495 | Not Available | Positive | 1039262 - 1039582 | 11373.2 |
| type ii toxin-antitoxin system vapc family toxin | DDQ68_RS04500 | Not Available | Negative | 1039943 - 1040482 | 19541.7 |
| hypothetical protein | DDQ68_RS04505 | Not Available | Negative | 1040502 - 1041320 | 30716.4 |
| sacsin n-terminal atp-binding-like domain-containing protein | DDQ68_RS04510 | Not Available | Negative | 1041443 - 1044886 | 128595.0 |
| hypothetical protein | DDQ68_RS04515 | Not Available | Negative | 1044950 - 1045981 | 37871.9 |
| duf4041 domain-containing protein | DDQ68_RS04520 | Not Available | Negative | 1046025 - 1047650 | 60721.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
