Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murein l,d-transpeptidase catalytic domain-containing protein | DDQ68_RS04425 | Not Available | Negative | 1017794 - 1018339 | 20181.8 |
| hypothetical protein | DDQ68_RS04430 | Not Available | Positive | 1018622 - 1019008 | 14459.6 |
| hypothetical protein | DDQ68_RS04435 | Not Available | Negative | 1019107 - 1019847 | 28304.7 |
| giy-yig nuclease family protein | DDQ68_RS04440 | Not Available | Positive | 1020140 - 1021126 | 37937.9 |
| dna/rna non-specific endonuclease | DDQ68_RS04445 | Not Available | Positive | 1021349 - 1022050 | 25312.5 |
| atp-dependent nuclease | DDQ68_RS04450 | Not Available | Negative | 1022262 - 1024052 | 66286.3 |
| dna cytosine methyltransferase | DDQ68_RS04455 | Not Available | Negative | 1024049 - 1025179 | 41539.6 |
| very short patch repair endonuclease | DDQ68_RS04460 | Not Available | Positive | 1025347 - 1025751 | 15633.1 |
| hypothetical protein | DDQ68_RS22535 | Not Available | Negative | 1025807 - 1026112 | 10977.3 |
| dna cytosine methyltransferase | DDQ68_RS04465 | Not Available | Negative | 1026154 - 1027317 | 43122.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
