Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine phosphatase family protein | DDQ68_RS04280 | Not Available | Negative | 988304 - 988849 | 19548.0 |
| response regulator transcription factor | DDQ68_RS04285 | Not Available | Positive | 989036 - 989719 | 25886.0 |
| sensor histidine kinase | DDQ68_RS04290 | Not Available | Positive | 989808 - 991160 | 50273.9 |
| hypothetical protein | DDQ68_RS04295 | Not Available | Positive | 991243 - 991431 | 6718.48 |
| 5'/3'-nucleotidase sure | DDQ68_RS04300 | Not Available | Negative | 991490 - 992392 | 32021.9 |
| m14 family zinc carboxypeptidase | DDQ68_RS04305 | Not Available | Positive | 992469 - 994235 | 65245.3 |
| duf5996 family protein | DDQ68_RS04310 | Not Available | Negative | 994330 - 994851 | 18636.7 |
| 2'-5' rna ligase family protein | DDQ68_RS04315 | Not Available | Positive | 995096 - 995782 | 25616.8 |
| bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase ii | DDQ68_RS04320 | Not Available | Negative | 995813 - 997057 | 44938.9 |
| glycosyltransferase | DDQ68_RS04325 | Not Available | Negative | 997205 - 998428 | 45217.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
