Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DDQ68_RS04225 | Not Available | Negative | 978443 - 978694 | 8897.05 |
| hd domain-containing protein | DDQ68_RS04230 | Not Available | Negative | 978785 - 979432 | 23197.3 |
| right-handed parallel beta-helix repeat-containing protein | DDQ68_RS04235 | Not Available | Negative | 979766 - 981667 | 65874.5 |
| type ii toxin-antitoxin system hica family toxin | DDQ68_RS04240 | Not Available | Positive | 982130 - 982378 | 9185.41 |
| type ii toxin-antitoxin system hicb family antitoxin | DDQ68_RS04245 | Not Available | Positive | 982407 - 982748 | 12352.6 |
| helix-turn-helix domain-containing protein | DDQ68_RS04250 | Not Available | Positive | 982752 - 983438 | 25293.7 |
| aaa domain-containing protein | DDQ68_RS04255 | Not Available | Positive | 983522 - 985507 | 74336.9 |
| hypothetical protein | DDQ68_RS04260 | Not Available | Positive | 985630 - 985893 | 9372.15 |
| smp-30/gluconolactonase/lre family protein | DDQ68_RS04265 | Not Available | Negative | 986015 - 987157 | 40813.2 |
| hypothetical protein | DDQ68_RS04275 | Not Available | Negative | 987734 - 988069 | 12234.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
