Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna methyltransferase | DDQ68_RS04075 | Not Available | Positive | 943981 - 944739 | 26413.0 |
| porin family protein | DDQ68_RS04080 | Not Available | Negative | 944978 - 946129 | 42072.0 |
| hypothetical protein | DDQ68_RS04085 | Not Available | Negative | 946156 - 947250 | 36337.0 |
| rna polymerase sigma factor | DDQ68_RS04090 | Not Available | Negative | 947330 - 947878 | 20344.6 |
| hypothetical protein | DDQ68_RS04095 | Not Available | Negative | 948070 - 948468 | 12230.4 |
| hypothetical protein | DDQ68_RS22520 | Not Available | Negative | 948745 - 949497 | 28927.0 |
| coa-binding protein | DDQ68_RS04100 | Not Available | Negative | 949518 - 949874 | 12999.6 |
| ribulose-phosphate 3-epimerase | DDQ68_RS04105 | Not Available | Positive | 950004 - 950717 | 24662.7 |
| carboxypeptidase regulatory-like domain-containing protein | DDQ68_RS04110 | Not Available | Positive | 950775 - 953336 | 94134.3 |
| transposase | DDQ68_RS04115 | Not Available | Positive | 953969 - 954691 | 27553.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
