Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa thioesterase | DDQ68_RS03985 | Not Available | Negative | 921908 - 922426 | 19049.1 |
| pkd domain-containing protein | DDQ68_RS03990 | Not Available | Negative | 922566 - 923660 | 35643.9 |
| is5/is1182 family transposase | DDQ68_RS24615 | Not Available | Negative | 923716 - 923898 | 6458.55 |
| hypothetical protein | DDQ68_RS23690 | Not Available | Negative | 923814 - 925259 | 49993.2 |
| chitobiase/beta-hexosaminidase c-terminal domain-containing protein | DDQ68_RS04000 | Not Available | Positive | 925599 - 927344 | 62835.3 |
| hypothetical protein | DDQ68_RS22515 | Not Available | Positive | 927350 - 927844 | 16290.5 |
| is5/is1182 family transposase | DDQ68_RS23695 | Not Available | Negative | 927980 - 928084 | 3832.77 |
| tlpa family protein disulfide reductase | DDQ68_RS04010 | Not Available | Negative | 928134 - 929126 | 36732.4 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | DDQ68_RS04015 | Not Available | Negative | 929346 - 930038 | 24587.8 |
| sugar transferase | DDQ68_RS04020 | Not Available | Positive | 930163 - 931584 | 52901.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
