Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DDQ68_RS03835 | Not Available | Negative | 898953 - 899456 | 18737.4 |
| is1 family transposase | DDQ68_RS22500 | Not Available | Positive | 899457 - 899855 | 14279.4 |
| is1 family transposase | DDQ68_RS03840 | Not Available | Positive | 899794 - 900246 | 18089.2 |
| transposase | DDQ68_RS03845 | Not Available | Positive | 900243 - 901355 | 41779.2 |
| is1 family transposase | DDQ68_RS03850 | Not Available | Negative | 901650 - 901829 | 7182.07 |
| is5/is1182 family transposase | DDQ68_RS24595 | Not Available | Negative | 901882 - 901956 | 2742.38 |
| is1-like element transposase | DDQ68_RS24600 | Not Available | Negative | 902089 - 902193 | 3711.66 |
| is3 family transposase | DDQ68_RS03865 | Not Available | Negative | 902449 - 903219 | 28860.9 |
| is481 family transposase | DDQ68_RS03870 | Not Available | Positive | 903280 - 904245 | 36684.1 |
| hypothetical protein | DDQ68_RS03875 | Not Available | Negative | 904374 - 904892 | 18896.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
