Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-(carboxyamino)imidazole ribonucleotide mutase | DDQ68_RS03750 | Not Available | Positive | 885642 - 886154 | 17459.2 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | DDQ68_RS03755 | Not Available | Positive | 886178 - 887401 | 42856.5 |
| glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | DDQ68_RS03760 | Not Available | Positive | 887496 - 888572 | 39459.7 |
| transposase | DDQ68_RS22485 | Not Available | Positive | 888988 - 889377 | 13529.3 |
| is630 family transposase | DDQ68_RS03765 | Not Available | Positive | 889380 - 890021 | 22981.2 |
| giy-yig nuclease family protein | DDQ68_RS03770 | Not Available | Positive | 890151 - 890441 | 11145.2 |
| carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit | DDQ68_RS03775 | Not Available | Positive | 890548 - 893778 | 118738.0 |
| hypothetical protein | DDQ68_RS03780 | Not Available | Positive | 893841 - 894050 | 6867.06 |
| hypothetical protein | DDQ68_RS03785 | Not Available | Negative | 894180 - 894500 | 11575.7 |
| transposase family protein | DDQ68_RS03790 | Not Available | Negative | 894566 - 895006 | 16413.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
