Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is5/is1182 family transposase | DDQ68_RS24590 | Not Available | Positive | 856114 - 856185 | 2761.3 |
| is1 family transposase | DDQ68_RS24210 | Not Available | Positive | 856256 - 856429 | 7107.83 |
| hypothetical protein | DDQ68_RS03620 | Not Available | Positive | 856475 - 856657 | 6474.13 |
| hypothetical protein | DDQ68_RS22475 | Not Available | Positive | 856661 - 856951 | 10269.3 |
| hypothetical protein | DDQ68_RS03625 | Not Available | Negative | 857670 - 857969 | 10675.0 |
| acyl-coa reductase | DDQ68_RS03630 | Not Available | Negative | 858024 - 859040 | 37070.4 |
| 4fe-4s binding protein | DDQ68_RS03635 | Not Available | Positive | 859210 - 859560 | 12732.9 |
| valine--trna ligase | DDQ68_RS03640 | Not Available | Positive | 859808 - 862441 | 98455.0 |
| t9ss type a sorting domain-containing protein | DDQ68_RS03645 | Not Available | Negative | 862693 - 864738 | 71607.9 |
| hypothetical protein | DDQ68_RS03650 | Not Available | Negative | 865431 - 865640 | 7556.25 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
