Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii 3-dehydroquinate dehydratase | DDQ68_RS03560 | Not Available | Negative | 844445 - 844891 | 16214.3 |
| site-specific tyrosine recombinase xerd | DDQ68_RS03565 | Not Available | Positive | 845071 - 845970 | 33387.4 |
| ftsk/spoiiie family dna translocase | DDQ68_RS03570 | Not Available | Positive | 846043 - 848973 | 103940.0 |
| lola family protein | DDQ68_RS03575 | Not Available | Positive | 849105 - 849752 | 24025.7 |
| duf2851 family protein | DDQ68_RS03580 | Not Available | Positive | 849902 - 851209 | 48128.9 |
| hypothetical protein | DDQ68_RS03585 | Not Available | Positive | 851206 - 852534 | 47145.5 |
| neud/pglb/viob family sugar acetyltransferase | DDQ68_RS03590 | Not Available | Positive | 852609 - 853241 | 21274.7 |
| rhodanese-related sulfurtransferase | DDQ68_RS03595 | Not Available | Positive | 853303 - 854247 | 34807.4 |
| nucleoside phosphorylase | DDQ68_RS03600 | Not Available | Positive | 854420 - 855292 | 31820.2 |
| is1 family transposase | DDQ68_RS24585 | Not Available | Positive | 855719 - 856114 | 14381.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
