Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | DDQ68_RS03510 | Not Available | Positive | 835530 - 836285 | 26297.7 |
| alpha/beta hydrolase | DDQ68_RS03515 | Not Available | Negative | 836282 - 836944 | 23862.4 |
| cytidine deaminase | DDQ68_RS03520 | Not Available | Negative | 837027 - 837524 | 17198.7 |
| saccharopine dehydrogenase family protein | DDQ68_RS03525 | Not Available | Positive | 837600 - 838961 | 48777.6 |
| hypothetical protein | DDQ68_RS03530 | Not Available | Positive | 839087 - 840154 | 38022.3 |
| atp-binding cassette domain-containing protein | DDQ68_RS03535 | Not Available | Positive | 840243 - 840935 | 25275.8 |
| trna1(val) (adenine(37)-n6)-methyltransferase | DDQ68_RS03540 | Not Available | Negative | 840950 - 841675 | 25230.3 |
| ribonuclease h family protein | DDQ68_RS03545 | Not Available | Negative | 841905 - 842378 | 17581.2 |
| marc family protein | DDQ68_RS03550 | Not Available | Negative | 842510 - 843070 | 20176.6 |
| aminotransferase class v-fold plp-dependent enzyme | DDQ68_RS03555 | Not Available | Negative | 843237 - 844316 | 39519.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
