Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxiredoxin | DDQ68_RS03460 | Not Available | Negative | 825072 - 825671 | 22173.2 |
| enoyl-coa hydratase-related protein | DDQ68_RS03465 | Not Available | Negative | 825835 - 826611 | 27508.6 |
| aspartate kinase | DDQ68_RS03470 | Not Available | Negative | 826866 - 828116 | 45300.3 |
| class 1 fructose-bisphosphatase | DDQ68_RS03475 | Not Available | Positive | 828208 - 829221 | 36657.6 |
| duf5606 domain-containing protein | DDQ68_RS03480 | Not Available | Negative | 829320 - 829850 | 18833.2 |
| energy transducer tonb | DDQ68_RS03485 | Not Available | Negative | 830056 - 830505 | 15596.2 |
| ribosome biogenesis gtp-binding protein yiha/ysxc | DDQ68_RS03490 | Not Available | Negative | 830595 - 831212 | 22839.6 |
| ompa family protein | DDQ68_RS03495 | Not Available | Positive | 831627 - 833867 | 82424.5 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | DDQ68_RS03500 | Not Available | Positive | 834016 - 834744 | 26801.2 |
| porin family protein | DDQ68_RS03505 | Not Available | Positive | 834750 - 835496 | 27764.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
