Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter permease subunit | DDQ68_RS03320 | Not Available | Negative | 789667 - 791964 | 83933.9 |
| hypothetical protein | DDQ68_RS03325 | Not Available | Positive | 792121 - 792372 | 8412.47 |
| transposase | DDQ68_RS24580 | Not Available | Negative | 792836 - 793156 | 12213.4 |
| hypothetical protein | DDQ68_RS03335 | Not Available | Negative | 793166 - 793417 | 8720.46 |
| (fe-s)-binding protein | DDQ68_RS03340 | Not Available | Positive | 794240 - 794995 | 26602.3 |
| 4-hydroxy-tetrahydrodipicolinate synthase | DDQ68_RS03345 | Not Available | Negative | 795272 - 796138 | 30190.6 |
| polysaccharide deacetylase family protein | DDQ68_RS03350 | Not Available | Positive | 796209 - 797147 | 33926.1 |
| lactonase family protein | DDQ68_RS03355 | Not Available | Positive | 797394 - 798596 | 41934.4 |
| nad-dependent dna ligase liga | DDQ68_RS03360 | Not Available | Negative | 798620 - 800707 | 75247.2 |
| hypothetical protein | DDQ68_RS22465 | Not Available | Negative | 800852 - 801028 | 6082.59 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
