Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa domain-containing protein | DDQ68_RS03260 | Not Available | Positive | 776545 - 780204 | 132700.0 |
| hypothetical protein | DDQ68_RS03265 | Not Available | Negative | 780234 - 781310 | 37377.0 |
| is5/is1182 family transposase | DDQ68_RS03275 | Not Available | Positive | 781655 - 782920 | 44695.3 |
| t9ss type a sorting domain-containing protein | DDQ68_RS03280 | Not Available | Positive | 782921 - 783574 | 22267.3 |
| l-rhamnose mutarotase | DDQ68_RS03285 | Not Available | Positive | 783851 - 784165 | 11655.1 |
| m20/m25/m40 family metallo-hydrolase | DDQ68_RS03290 | Not Available | Positive | 784243 - 785790 | 54772.9 |
| is5/is1182 family transposase | DDQ68_RS03300 | Not Available | Negative | 785836 - 786792 | 34544.5 |
| duf2809 domain-containing protein | DDQ68_RS03305 | Not Available | Negative | 787126 - 787338 | 7824.74 |
| oxygenase mpab family protein | DDQ68_RS03310 | Not Available | Negative | 787418 - 788254 | 30705.2 |
| gfo/idh/moca family protein | DDQ68_RS03315 | Not Available | Positive | 788540 - 789649 | 40319.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
