Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | DDQ68_RS03160 | Not Available | Negative | 756907 - 757482 | 21308.8 |
| had family hydrolase | DDQ68_RS03165 | Not Available | Positive | 757594 - 758331 | 26368.5 |
| transposase family protein | DDQ68_RS03170 | Not Available | Positive | 758445 - 758948 | 18834.3 |
| transposase family protein | DDQ68_RS03175 | Not Available | Positive | 758954 - 759394 | 16413.1 |
| alkaline phosphatase family protein | DDQ68_RS03180 | Not Available | Negative | 759638 - 760903 | 45497.2 |
| sulfatase-like hydrolase/transferase | DDQ68_RS03185 | Not Available | Negative | 760978 - 762183 | 43739.8 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DDQ68_RS03190 | Not Available | Negative | 762337 - 763920 | 57391.5 |
| susc/raga family tonb-linked outer membrane protein | DDQ68_RS03195 | Not Available | Negative | 763940 - 767245 | 120518.0 |
| phosphonate degradation hd-domain oxygenase | DDQ68_RS03200 | Not Available | Negative | 767351 - 767932 | 21147.9 |
| mfs transporter | DDQ68_RS03205 | Not Available | Negative | 768292 - 769635 | 45980.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
