Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxamine 5'-phosphate oxidase | DDQ68_RS03015 | Not Available | Negative | 726367 - 727020 | 24390.7 |
| yqge/algh family protein | DDQ68_RS03020 | Not Available | Positive | 727285 - 727842 | 19655.7 |
| duf349 domain-containing protein | DDQ68_RS03025 | Not Available | Positive | 727943 - 730363 | 87718.9 |
| glyoxalase superfamily protein | DDQ68_RS03030 | Not Available | Positive | 730651 - 730974 | 11775.3 |
| Trna-thr | Not Available | Not Available | Positive | 731040 - 731112 | Not Available |
| universal stress protein | DDQ68_RS03040 | Not Available | Negative | 731287 - 732108 | 28349.5 |
| nad(p)-dependent oxidoreductase | DDQ68_RS03045 | Not Available | Positive | 732293 - 733279 | 35021.0 |
| bluf domain-containing protein | DDQ68_RS03050 | Not Available | Positive | 733322 - 733798 | 17510.1 |
| l,d-transpeptidase family protein | DDQ68_RS03055 | Not Available | Positive | 733812 - 735305 | 53921.5 |
| hypothetical protein | DDQ68_RS03060 | Not Available | Positive | 735737 - 736177 | 16416.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
