Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exosortase x | DDQ68_RS02775 | Not Available | Negative | 670414 - 670980 | 20124.7 |
| pid-cterm protein-sorting domain-containing protein | DDQ68_RS02780 | Not Available | Negative | 671124 - 671369 | 8301.35 |
| duf4394 domain-containing protein | DDQ68_RS02785 | Not Available | Negative | 671449 - 675171 | 125505.0 |
| sugar mfs transporter | DDQ68_RS02790 | Not Available | Negative | 675401 - 676750 | 48311.8 |
| fad-containing oxidoreductase | DDQ68_RS02795 | Not Available | Negative | 676922 - 678316 | 49127.2 |
| abc transporter permease/substrate-binding protein | DDQ68_RS02800 | Not Available | Negative | 678766 - 680337 | 54996.9 |
| chloramphenicol acetyltransferase | DDQ68_RS02805 | Not Available | Negative | 680564 - 681205 | 23358.7 |
| hypothetical protein | DDQ68_RS02810 | Not Available | Positive | 681204 - 681542 | 12300.0 |
| abc transporter atp-binding protein | DDQ68_RS02815 | Not Available | Negative | 681652 - 682623 | 34428.2 |
| t9ss type a sorting domain-containing protein | DDQ68_RS02820 | Not Available | Negative | 682756 - 683538 | 26550.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
