Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | DDQ68_RS02725 | Not Available | Negative | 656586 - 657398 | 31091.4 |
| amidohydrolase family protein | DDQ68_RS02730 | Not Available | Negative | 657671 - 657916 | 8839.57 |
| 2,3-diphosphoglycerate-dependent phosphoglycerate mutase | DDQ68_RS02735 | Not Available | Positive | 658027 - 658716 | 26503.5 |
| acetyl-coa carboxylase biotin carboxylase subunit | DDQ68_RS02740 | Not Available | Negative | 659179 - 660690 | 54419.3 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | DDQ68_RS02745 | Not Available | Positive | 660906 - 662153 | 45530.1 |
| is5/is1182 family transposase | DDQ68_RS24375 | Not Available | Positive | 662407 - 662577 | 6610.94 |
| tyrosine--trna ligase | DDQ68_RS02755 | Not Available | Negative | 662771 - 664084 | 47279.4 |
| dna polymerase iii subunit delta | DDQ68_RS02760 | Not Available | Positive | 664234 - 665295 | 39200.9 |
| t9ss type a sorting domain-containing protein | DDQ68_RS02765 | Not Available | Negative | 665396 - 669472 | 133383.0 |
| xrtx-associated membrane protein | DDQ68_RS02770 | Not Available | Negative | 669969 - 670424 | 15692.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
