Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| citrate synthase | DDQ68_RS02625 | Not Available | Negative | 635502 - 636794 | 48111.5 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | DDQ68_RS02630 | Not Available | Negative | 636962 - 638368 | 49051.9 |
| metal-dependent transcriptional regulator | DDQ68_RS02635 | Not Available | Negative | 638643 - 639299 | 24407.3 |
| 3-oxoacyl-acp synthase iii family protein | DDQ68_RS02640 | Not Available | Negative | 639578 - 640579 | 36488.4 |
| glycosyltransferase | DDQ68_RS02645 | Not Available | Negative | 640670 - 641839 | 41047.3 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | DDQ68_RS02650 | Not Available | Positive | 641928 - 642764 | 29347.3 |
| peptide-methionine (s)-s-oxide reductase msra | DDQ68_RS02655 | Not Available | Negative | 643036 - 643575 | 20150.7 |
| rieske (2fe-2s) protein | DDQ68_RS02660 | Not Available | Positive | 644196 - 644645 | 14936.6 |
| thioredoxin family protein | DDQ68_RS02665 | Not Available | Positive | 644706 - 645161 | 16363.8 |
| fad:protein fmn transferase | DDQ68_RS02670 | Not Available | Positive | 645178 - 646275 | 39180.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
