Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine pyrophosphate-dependent enzyme | DDQ68_RS02580 | Not Available | Positive | 623840 - 626257 | 88409.8 |
| hypothetical protein | DDQ68_RS02585 | Not Available | Negative | 626361 - 626909 | 19843.3 |
| acyl transferase | DDQ68_RS02590 | Not Available | Positive | 627030 - 628034 | 36924.0 |
| translation elongation factor 4 | DDQ68_RS02595 | Not Available | Positive | 628281 - 630068 | 66435.9 |
| hypothetical protein | DDQ68_RS22430 | Not Available | Positive | 630122 - 630589 | 17142.6 |
| bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase | DDQ68_RS02600 | Not Available | Positive | 630620 - 631528 | 31786.8 |
| 7-carboxy-7-deazaguanine synthase quee | DDQ68_RS02605 | Not Available | Positive | 631762 - 632343 | 21349.3 |
| ompa family protein | DDQ68_RS02610 | Not Available | Positive | 632354 - 634348 | 71902.1 |
| hypothetical protein | DDQ68_RS02615 | Not Available | Positive | 634772 - 635152 | 13171.8 |
| duf4177 domain-containing protein | DDQ68_RS02620 | Not Available | Positive | 635225 - 635416 | 7367.83 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
