Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i dna topoisomerase | DDQ68_RS02435 | Not Available | Negative | 585577 - 588096 | 92126.5 |
| hamp domain-containing protein | DDQ68_RS02440 | Not Available | Positive | 588358 - 592074 | 129998.0 |
| chemotaxis protein chew | DDQ68_RS02445 | Not Available | Positive | 592110 - 592625 | 18578.8 |
| response regulator | DDQ68_RS02450 | Not Available | Positive | 592717 - 593091 | 13282.2 |
| chemotaxis protein chea | DDQ68_RS02455 | Not Available | Positive | 593209 - 594855 | 59512.1 |
| chemotaxis protein chec | DDQ68_RS02460 | Not Available | Positive | 594926 - 595561 | 23407.5 |
| agmatinase family protein | DDQ68_RS02465 | Not Available | Positive | 595745 - 596836 | 39089.7 |
| phage holin family protein | DDQ68_RS02470 | Not Available | Positive | 596887 - 597225 | 11743.2 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | DDQ68_RS02475 | Not Available | Negative | 597485 - 598789 | 47428.0 |
| duf4290 domain-containing protein | DDQ68_RS02480 | Not Available | Negative | 598978 - 599736 | 28043.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
