Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vwa domain-containing protein | DDQ68_RS02385 | Not Available | Negative | 576132 - 577169 | 36417.9 |
| Trna-ser | Not Available | Not Available | Positive | 577256 - 577343 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 577572 - 577645 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 577664 - 577737 | Not Available |
| dna topoisomerase (atp-hydrolyzing) subunit b | DDQ68_RS02405 | Not Available | Positive | 577918 - 579903 | 73800.7 |
| hypothetical protein | DDQ68_RS24565 | Not Available | Negative | 579900 - 580208 | 11086.5 |
| is5/is1182 family transposase | DDQ68_RS24570 | Not Available | Negative | 580327 - 580611 | 10805.9 |
| polyphosphate kinase 1 | DDQ68_RS02420 | Not Available | Positive | 581181 - 583517 | 88689.6 |
| phosphatase | DDQ68_RS02425 | Not Available | Negative | 583641 - 584630 | 36792.2 |
| sir2 family nad-dependent protein deacetylase | DDQ68_RS02430 | Not Available | Negative | 584710 - 585396 | 24649.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
