Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase family protein | DDQ68_RS02150 | Not Available | Positive | 521204 - 521644 | 16413.1 |
| pin domain-containing protein | DDQ68_RS22400 | Not Available | Positive | 521658 - 522500 | 33368.9 |
| phytanoyl-coa dioxygenase family protein | DDQ68_RS22405 | Not Available | Positive | 522548 - 522697 | 5469.73 |
| dicarboxylate/amino acid:cation symporter | DDQ68_RS02155 | Not Available | Negative | 522940 - 524271 | 47342.6 |
| duf6728 family protein | DDQ68_RS23265 | Not Available | Positive | 524787 - 524960 | 6761.49 |
| mmcq/yjbr family dna-binding protein | DDQ68_RS02160 | Not Available | Positive | 524975 - 525337 | 13118.8 |
| rrf2 family transcriptional regulator | DDQ68_RS02165 | Not Available | Positive | 525358 - 525792 | 15093.5 |
| helix-turn-helix domain-containing protein | DDQ68_RS02170 | Not Available | Positive | 526088 - 526558 | 16672.1 |
| is630 family transposase | DDQ68_RS02175 | Not Available | Positive | 526516 - 527253 | 27669.2 |
| m14 family metallopeptidase | DDQ68_RS02180 | Not Available | Negative | 527499 - 530126 | 97082.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
