Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heavy-metal-associated domain-containing protein | DDQ68_RS22110 | Not Available | Negative | 4989199 - 4989573 | 13170.7 |
| tonb-dependent receptor domain-containing protein | DDQ68_RS22115 | Not Available | Negative | 4989757 - 4992102 | 85826.2 |
| hypothetical protein | DDQ68_RS22120 | Not Available | Negative | 4992198 - 4992635 | 15544.0 |
| pep-cterm sorting domain-containing protein | DDQ68_RS22125 | Not Available | Negative | 4992714 - 4993742 | 36789.3 |
| division/cell wall cluster transcriptional repressor mraz | DDQ68_RS22130 | Not Available | Positive | 4993932 - 4994393 | 17733.5 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | DDQ68_RS22135 | Not Available | Positive | 4994393 - 4995319 | 34263.7 |
| ftsl-like putative cell division protein | DDQ68_RS23600 | Not Available | Positive | 4995490 - 4996404 | 33166.0 |
| penicillin-binding protein | DDQ68_RS22145 | Not Available | Positive | 4996401 - 4998845 | 89041.0 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | DDQ68_RS22150 | Not Available | Positive | 4998915 - 5000363 | 51655.1 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | DDQ68_RS22155 | Not Available | Positive | 5000401 - 5001621 | 45066.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
