Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtab | DDQ68_RS02110 | Not Available | Negative | 511228 - 512562 | 48946.7 |
| glutamine synthetase iii | DDQ68_RS02115 | Not Available | Positive | 512873 - 515062 | 80939.8 |
| hypothetical protein | DDQ68_RS02120 | Not Available | Negative | 515265 - 515777 | 18113.4 |
| hypothetical protein | DDQ68_RS02125 | Not Available | Positive | 515973 - 516338 | 13487.1 |
| is5/is1182 family transposase | DDQ68_RS24545 | Not Available | Positive | 516456 - 516545 | 3606.29 |
| is5/is1182 family transposase | DDQ68_RS24550 | Not Available | Positive | 516608 - 516691 | 3299.68 |
| nad(p)h-quinone oxidoreductase | DDQ68_RS02135 | Not Available | Positive | 516944 - 517918 | 33516.6 |
| (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | DDQ68_RS02140 | Not Available | Positive | 518296 - 520302 | 73874.3 |
| pin domain-containing protein | DDQ68_RS24555 | Not Available | Positive | 520377 - 520637 | 10220.2 |
| transposase family protein | DDQ68_RS02145 | Not Available | Positive | 520695 - 521198 | 18834.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
