Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | DDQ68_RS21725 | Not Available | Negative | 4910306 - 4910545 | 8565.58 |
| is110 family transposase | DDQ68_RS21730 | Not Available | Negative | 4910654 - 4911175 | 19125.1 |
| cia30 family protein | DDQ68_RS21735 | Not Available | Positive | 4912118 - 4912636 | 19533.0 |
| is5/is1182 family transposase | DDQ68_RS21740 | Not Available | Negative | 4912858 - 4913142 | 11287.2 |
| is3 family transposase | DDQ68_RS21745 | Not Available | Negative | 4913214 - 4914310 | 42306.7 |
| is3 family transposase | DDQ68_RS21750 | Not Available | Negative | 4914912 - 4915799 | 33009.3 |
| transposase | DDQ68_RS21755 | Not Available | Negative | 4915796 - 4916104 | 11123.3 |
| gluconate 2-dehydrogenase subunit 3 family protein | DDQ68_RS21760 | Not Available | Negative | 4916200 - 4916835 | 23010.9 |
| gmc family oxidoreductase | DDQ68_RS21765 | Not Available | Negative | 4916854 - 4918596 | 63478.6 |
| duf1080 domain-containing protein | DDQ68_RS21770 | Not Available | Negative | 4918612 - 4919205 | 21701.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
