Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | DDQ68_RS21680 | Not Available | Positive | 4896114 - 4896686 | 20693.1 |
| hypothetical protein | DDQ68_RS23225 | Not Available | Negative | 4896727 - 4896903 | 6580.07 |
| vit family protein | DDQ68_RS21685 | Not Available | Negative | 4897020 - 4897709 | 23374.1 |
| bifunctional ynce family protein/alkaline phosphatase family protein | DDQ68_RS21690 | Not Available | Positive | 4898441 - 4901176 | 98858.9 |
| susc/raga family tonb-linked outer membrane protein | DDQ68_RS21695 | Not Available | Positive | 4901401 - 4904334 | 105829.0 |
| ragb/susd family nutrient uptake outer membrane protein | DDQ68_RS21700 | Not Available | Positive | 4904359 - 4905963 | 59518.0 |
| phosphatidylinositol-specific phospholipase c1-like protein | DDQ68_RS21705 | Not Available | Positive | 4906016 - 4907110 | 39665.2 |
| ceha/mcba family metallohydrolase | DDQ68_RS21710 | Not Available | Positive | 4907163 - 4908569 | 50258.9 |
| is3 family transposase | DDQ68_RS21715 | Not Available | Negative | 4908947 - 4909822 | 33563.0 |
| transposase | DDQ68_RS21720 | Not Available | Negative | 4909819 - 4910106 | 10597.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
