Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent epimerase/dehydratase family protein | DDQ68_RS21355 | Not Available | Negative | 4805395 - 4806069 | 24382.7 |
| vwa domain-containing protein | DDQ68_RS21360 | Not Available | Negative | 4806173 - 4808248 | 74854.8 |
| had family hydrolase | DDQ68_RS21365 | Not Available | Positive | 4808410 - 4809072 | 23705.3 |
| yiix/yebb-like n1pc/p60 family cysteine hydrolase | DDQ68_RS21370 | Not Available | Negative | 4809138 - 4809488 | 12671.9 |
| hypothetical protein | DDQ68_RS23210 | Not Available | Negative | 4810354 - 4810593 | 8907.8 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | DDQ68_RS21375 | Not Available | Negative | 4810715 - 4811464 | 26143.3 |
| geranylgeranyl reductase family protein | DDQ68_RS21380 | Not Available | Positive | 4811573 - 4812820 | 45489.1 |
| tetratricopeptide repeat protein | DDQ68_RS21385 | Not Available | Negative | 4812903 - 4813790 | 31596.3 |
| dihydrolipoyl dehydrogenase | DDQ68_RS21390 | Not Available | Positive | 4814028 - 4815422 | 49584.4 |
| duf6624 domain-containing protein | DDQ68_RS21395 | Not Available | Negative | 4815481 - 4816113 | 23725.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
