Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent phosphogluconate dehydrogenase | DDQ68_RS21135 | Not Available | Positive | 4758468 - 4759997 | 54777.8 |
| glucose-6-phosphate dehydrogenase | DDQ68_RS21140 | Not Available | Positive | 4759998 - 4761512 | 57465.7 |
| 6-phosphogluconolactonase | DDQ68_RS21145 | Not Available | Positive | 4761516 - 4762238 | 25739.5 |
| ribose-5-phosphate isomerase rpia | DDQ68_RS21150 | Not Available | Negative | 4762462 - 4763226 | 26531.4 |
| duf2911 domain-containing protein | DDQ68_RS21155 | Not Available | Negative | 4763417 - 4764301 | 31553.7 |
| type ii toxin-antitoxin system hica family toxin | DDQ68_RS21160 | Not Available | Negative | 4764388 - 4764549 | 5975.17 |
| type ii toxin-antitoxin system hicb family antitoxin | DDQ68_RS24110 | Not Available | Negative | 4764576 - 4764800 | 8402.04 |
| is5/is1182 family transposase | DDQ68_RS24115 | Not Available | Negative | 4764916 - 4764969 | 2002.47 |
| hypothetical protein | DDQ68_RS23185 | Not Available | Negative | 4765118 - 4765720 | 22159.9 |
| abc transporter atp-binding protein | DDQ68_RS21170 | Not Available | Negative | 4765859 - 4767703 | 67234.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
