Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exodeoxyribonuclease vii large subunit | DDQ68_RS21035 | Not Available | Negative | 4733845 - 4735182 | 50125.9 |
| m13 family metallopeptidase | DDQ68_RS21040 | Not Available | Positive | 4735339 - 4737450 | 76841.2 |
| acyltransferase family protein | DDQ68_RS21045 | Not Available | Negative | 4737583 - 4738656 | 39285.6 |
| m13 family metallopeptidase | DDQ68_RS21050 | Not Available | Positive | 4738861 - 4740936 | 76193.8 |
| peptidylprolyl isomerase | DDQ68_RS21055 | Not Available | Negative | 4741008 - 4741751 | 26958.4 |
| zinc dependent phospholipase c family protein | DDQ68_RS21060 | Not Available | Negative | 4741917 - 4743143 | 45091.3 |
| metal-dependent hydrolase family protein | DDQ68_RS21065 | Not Available | Negative | 4743551 - 4744849 | 45518.5 |
| acyl-coa-binding protein | DDQ68_RS21070 | Not Available | Positive | 4744956 - 4745210 | 9070.6 |
| hypothetical protein | DDQ68_RS21075 | Not Available | Positive | 4745338 - 4746375 | 40259.1 |
| cdgsh iron-sulfur domain-containing protein | DDQ68_RS21080 | Not Available | Negative | 4746703 - 4746927 | 7929.42 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
