Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| proline dehydrogenase family protein | DDQ68_RS20885 | Not Available | Negative | 4692325 - 4693518 | 44250.6 |
| chorismate mutase | DDQ68_RS20890 | Not Available | Positive | 4693640 - 4694761 | 41172.6 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DDQ68_RS20895 | Not Available | Negative | 4694851 - 4696461 | 57498.2 |
| susc/raga family tonb-linked outer membrane protein | DDQ68_RS20900 | Not Available | Negative | 4696475 - 4699744 | 117524.0 |
| 3-dehydroquinate synthase family protein | DDQ68_RS20905 | Not Available | Positive | 4700026 - 4701066 | 37674.4 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | DDQ68_RS20910 | Not Available | Positive | 4701214 - 4702377 | 40610.8 |
| abc transporter substrate-binding protein | DDQ68_RS20915 | Not Available | Negative | 4702355 - 4703170 | 29355.5 |
| m42 family metallopeptidase | DDQ68_RS20920 | Not Available | Negative | 4703338 - 4704408 | 39519.1 |
| acyl-coa carboxylase subunit beta | DDQ68_RS20925 | Not Available | Negative | 4704531 - 4706099 | 56625.8 |
| s9 family peptidase | DDQ68_RS20930 | Not Available | Negative | 4706177 - 4708315 | 79931.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
