Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter permease subunit | DDQ68_RS02015 | Not Available | Negative | 487174 - 490284 | 113409.0 |
| efflux rnd transporter periplasmic adaptor subunit | DDQ68_RS02020 | Not Available | Negative | 490436 - 491572 | 41085.8 |
| tolc family protein | DDQ68_RS02025 | Not Available | Negative | 491766 - 493340 | 56724.4 |
| sulp family inorganic anion transporter | DDQ68_RS02030 | Not Available | Negative | 493649 - 495193 | 54476.1 |
| sensor histidine kinase | DDQ68_RS02035 | Not Available | Negative | 495553 - 496920 | 50434.9 |
| response regulator transcription factor | DDQ68_RS02040 | Not Available | Negative | 497250 - 497936 | 25425.7 |
| ompa family protein | DDQ68_RS02045 | Not Available | Negative | 498199 - 499380 | 38969.8 |
| tetratricopeptide repeat protein | DDQ68_RS02050 | Not Available | Negative | 499657 - 499998 | 12678.7 |
| electron transfer flavoprotein subunit beta/fixa family protein | DDQ68_RS02055 | Not Available | Positive | 500165 - 500905 | 26375.0 |
| electron transfer flavoprotein subunit alpha/fixb family protein | DDQ68_RS02060 | Not Available | Positive | 501031 - 502008 | 33938.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
