Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DDQ68_RS23180 | Not Available | Negative | 4655351 - 4655518 | 5926.48 |
| efflux rnd transporter permease subunit | DDQ68_RS20740 | Not Available | Negative | 4656070 - 4659324 | 116968.0 |
| efflux rnd transporter periplasmic adaptor subunit | DDQ68_RS20745 | Not Available | Negative | 4659438 - 4660601 | 40439.3 |
| tolc family protein | DDQ68_RS20750 | Not Available | Negative | 4660620 - 4661996 | 51323.1 |
| m28 family metallopeptidase | DDQ68_RS20755 | Not Available | Positive | 4662240 - 4663838 | 57418.7 |
| spy/cpxp family protein refolding chaperone | DDQ68_RS20760 | Not Available | Negative | 4663992 - 4664456 | 16968.6 |
| hypothetical protein | DDQ68_RS20765 | Not Available | Negative | 4664723 - 4666267 | 60110.4 |
| 2-isopropylmalate synthase | DDQ68_RS20770 | Not Available | Positive | 4666435 - 4667601 | 41759.8 |
| 3-isopropylmalate dehydratase large subunit | DDQ68_RS20775 | Not Available | Positive | 4667614 - 4669005 | 50058.9 |
| 3-isopropylmalate dehydratase small subunit | DDQ68_RS20780 | Not Available | Positive | 4669005 - 4669601 | 22183.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
