Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly factor bamd | DDQ68_RS20690 | Not Available | Positive | 4646195 - 4647034 | 31985.8 |
| dna-directed rna polymerase subunit omega | DDQ68_RS20695 | Not Available | Positive | 4647176 - 4647523 | 13072.5 |
| flavoprotein | DDQ68_RS20700 | Not Available | Positive | 4647557 - 4648117 | 19376.6 |
| phosphopantothenoylcysteine decarboxylase | DDQ68_RS20705 | Not Available | Positive | 4648165 - 4648821 | 22755.5 |
| duf4835 family protein | DDQ68_RS20710 | Not Available | Positive | 4648830 - 4649756 | 34359.9 |
| dna repair protein recn | DDQ68_RS20715 | Not Available | Positive | 4649947 - 4651623 | 61883.0 |
| enoyl-acp reductase | DDQ68_RS20720 | Not Available | Positive | 4651752 - 4652573 | 29746.6 |
| is5/is1182 family transposase | DDQ68_RS24095 | Not Available | Positive | 4652839 - 4652928 | 3444.32 |
| brp/blh family beta-carotene 15,15'-dioxygenase | DDQ68_RS24100 | Not Available | Negative | 4653066 - 4654076 | 35777.3 |
| bacteriorhodopsin | DDQ68_RS20735 | Not Available | Negative | 4654187 - 4654963 | 28183.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
