Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhomboid family intramembrane serine protease | DDQ68_RS20640 | Not Available | Positive | 4636604 - 4637398 | 29801.4 |
| rhomboid family intramembrane serine protease | DDQ68_RS20645 | Not Available | Positive | 4637471 - 4638376 | 32626.1 |
| duf433 domain-containing protein | DDQ68_RS20650 | Not Available | Positive | 4638427 - 4638633 | 7728.38 |
| hypothetical protein | DDQ68_RS20655 | Not Available | Positive | 4638648 - 4638848 | 7386.22 |
| type ii toxin-antitoxin system rele family toxin | DDQ68_RS20660 | Not Available | Positive | 4638845 - 4639111 | 9823.14 |
| malate dehydrogenase | DDQ68_RS20665 | Not Available | Negative | 4639186 - 4640127 | 33217.4 |
| glycoside hydrolase family 9 protein | DDQ68_RS20670 | Not Available | Positive | 4640364 - 4642142 | 64320.1 |
| trna lysidine(34) synthetase tils | DDQ68_RS20675 | Not Available | Negative | 4642168 - 4643496 | 49419.2 |
| adenylate kinase | DDQ68_RS20680 | Not Available | Negative | 4643703 - 4644227 | 18942.6 |
| osta-like protein | DDQ68_RS20685 | Not Available | Positive | 4644325 - 4646076 | 65518.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
