Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DDQ68_RS20490 | Not Available | Positive | 4604440 - 4605324 | 31036.5 |
| is5 family transposase | DDQ68_RS20495 | Not Available | Positive | 4605409 - 4606239 | 31636.0 |
| t9ss type a sorting domain-containing protein | DDQ68_RS20500 | Not Available | Positive | 4606539 - 4607570 | 36456.0 |
| transposase | DDQ68_RS23175 | Not Available | Positive | 4607996 - 4608385 | 13559.4 |
| is630 family transposase | DDQ68_RS20505 | Not Available | Positive | 4608388 - 4608957 | 21020.1 |
| sterol desaturase family protein | DDQ68_RS20510 | Not Available | Negative | 4608971 - 4609864 | 33220.0 |
| tigr04283 family arsenosugar biosynthesis glycosyltransferase | DDQ68_RS20515 | Not Available | Positive | 4610038 - 4610739 | 25710.3 |
| tigr04282 family arsenosugar biosynthesis glycosyltransferase | DDQ68_RS20520 | Not Available | Positive | 4610812 - 4611441 | 22137.7 |
| hypothetical protein | DDQ68_RS20525 | Not Available | Negative | 4611464 - 4612825 | 49449.8 |
| glycosyltransferase family 2 protein | DDQ68_RS20530 | Not Available | Negative | 4613042 - 4613746 | 25147.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
