Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | DDQ68_RS20440 | Not Available | Positive | 4594330 - 4595265 | 35016.4 |
| abc transporter permease | DDQ68_RS20445 | Not Available | Positive | 4595281 - 4596705 | 50749.0 |
| chan family lipoprotein | DDQ68_RS20450 | Not Available | Positive | 4597019 - 4597903 | 32206.7 |
| mbl fold metallo-hydrolase | DDQ68_RS20455 | Not Available | Positive | 4597932 - 4598882 | 33719.9 |
| hypothetical protein | DDQ68_RS20460 | Not Available | Negative | 4599075 - 4599263 | 6741.94 |
| hesb/isca family protein | DDQ68_RS20465 | Not Available | Negative | 4599318 - 4599665 | 12405.9 |
| hypothetical protein | DDQ68_RS20470 | Not Available | Positive | 4599879 - 4600415 | 20014.4 |
| 5' nucleotidase, nt5c type | DDQ68_RS20475 | Not Available | Positive | 4600450 - 4600983 | 20568.3 |
| n-acetyl-alpha-d-glucosaminyl l-malate synthase bsha | DDQ68_RS20480 | Not Available | Negative | 4601097 - 4602233 | 41755.4 |
| m1 family metallopeptidase | DDQ68_RS20485 | Not Available | Positive | 4602442 - 4604331 | 71037.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
