Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium-translocating pyrophosphatase | DDQ68_RS20390 | Not Available | Positive | 4581304 - 4583544 | 76564.2 |
| hypoxanthine phosphoribosyltransferase | DDQ68_RS20395 | Not Available | Positive | 4584088 - 4584630 | 19503.5 |
| adenylate kinase | DDQ68_RS20400 | Not Available | Positive | 4584716 - 4585327 | 21897.3 |
| gtpase obge | DDQ68_RS20405 | Not Available | Positive | 4585470 - 4586468 | 35609.9 |
| pas domain-containing protein | DDQ68_RS20410 | Not Available | Positive | 4586576 - 4589656 | 110819.0 |
| lytr/algr family response regulator transcription factor | DDQ68_RS20415 | Not Available | Negative | 4589895 - 4590626 | 27234.1 |
| nucleotide exchange factor grpe | DDQ68_RS20420 | Not Available | Positive | 4591133 - 4591669 | 19474.9 |
| molecular chaperone dnaj | DDQ68_RS20425 | Not Available | Positive | 4591815 - 4592948 | 41229.1 |
| sigma-70 family rna polymerase sigma factor | DDQ68_RS20430 | Not Available | Positive | 4593111 - 4593623 | 19266.2 |
| hypothetical protein | DDQ68_RS20435 | Not Available | Positive | 4593623 - 4594267 | 23740.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
