Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-glucuronic acid decarboxylase family protein | DDQ68_RS20245 | Not Available | Positive | 4547694 - 4548641 | 35643.9 |
| sugar 3,4-ketoisomerase | DDQ68_RS20250 | Not Available | Positive | 4548705 - 4549121 | 15504.3 |
| degt/dnrj/eryc1/strs family aminotransferase | DDQ68_RS20255 | Not Available | Positive | 4549201 - 4550310 | 39220.1 |
| glycosyltransferase family 2 protein | DDQ68_RS20260 | Not Available | Positive | 4550402 - 4551328 | 34305.0 |
| gdp-mannose 4,6-dehydratase | DDQ68_RS20265 | Not Available | Positive | 4553035 - 4554150 | 42128.3 |
| gdp-l-fucose synthase family protein | DDQ68_RS20270 | Not Available | Positive | 4554955 - 4555890 | 34646.4 |
| abc transporter permease | DDQ68_RS20275 | Not Available | Positive | 4555985 - 4556884 | 33521.7 |
| polysaccharide abc transporter atp-binding protein | DDQ68_RS20280 | Not Available | Positive | 4556943 - 4558190 | 46036.5 |
| hypothetical protein | DDQ68_RS23160 | Not Available | Positive | 4558187 - 4558348 | 5918.25 |
| acyltransferase | DDQ68_RS20285 | Not Available | Positive | 4558367 - 4558978 | 22609.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
