Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2252 family protein | DDQ68_RS20195 | Not Available | Positive | 4532033 - 4533076 | 37463.3 |
| heavy-metal-associated domain-containing protein | DDQ68_RS20200 | Not Available | Negative | 4533133 - 4533339 | 7222.66 |
| Trna-ala | Not Available | Not Available | Positive | 4533508 - 4533581 | Not Available |
| carboxypeptidase regulatory-like domain-containing protein | DDQ68_RS20210 | Not Available | Negative | 4533768 - 4536932 | 114904.0 |
| tonb-dependent receptor | DDQ68_RS20215 | Not Available | Negative | 4537363 - 4540797 | 124013.0 |
| c40 family peptidase | DDQ68_RS20220 | Not Available | Negative | 4541046 - 4541681 | 22586.2 |
| fad-binding oxidoreductase | DDQ68_RS20225 | Not Available | Positive | 4541809 - 4543221 | 51393.1 |
| acyl-coa-binding protein | DDQ68_RS20230 | Not Available | Negative | 4543422 - 4543865 | 15327.2 |
| asparagine synthase (glutamine-hydrolyzing) | DDQ68_RS20235 | Not Available | Positive | 4543989 - 4545893 | 72172.8 |
| udp-glucose dehydrogenase family protein | DDQ68_RS20240 | Not Available | Positive | 4546318 - 4547661 | 48708.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
