Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside deaminase | DDQ68_RS20140 | Not Available | Negative | 4521908 - 4522384 | 17523.0 |
| hypothetical protein | DDQ68_RS20145 | Not Available | Negative | 4522490 - 4523422 | 33016.5 |
| glycosyltransferase family protein | DDQ68_RS20150 | Not Available | Positive | 4523633 - 4524706 | 38777.8 |
| peptidylprolyl isomerase | DDQ68_RS20155 | Not Available | Positive | 4524820 - 4526877 | 72194.2 |
| mechanosensitive ion channel family protein | DDQ68_RS20160 | Not Available | Positive | 4527058 - 4527864 | 27823.5 |
| energy transducer tonb | DDQ68_RS20165 | Not Available | Negative | 4527882 - 4528607 | 26504.7 |
| cupin domain-containing protein | DDQ68_RS20170 | Not Available | Negative | 4528769 - 4529104 | 11887.9 |
| serine o-acetyltransferase | DDQ68_RS20175 | Not Available | Positive | 4529261 - 4530100 | 29416.3 |
| cysteine synthase a | DDQ68_RS20180 | Not Available | Positive | 4530245 - 4531168 | 32708.7 |
| duf4890 domain-containing protein | DDQ68_RS20185 | Not Available | Negative | 4531264 - 4531716 | 15555.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
