Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein insertion efficiency factor yidd | DDQ68_RS19970 | Not Available | Negative | 4485924 - 4486148 | 8377.24 |
| duf4357 domain-containing protein | DDQ68_RS19975 | Not Available | Positive | 4486238 - 4487371 | 40818.1 |
| m48 family metallopeptidase | DDQ68_RS19980 | Not Available | Negative | 4487383 - 4488117 | 27235.1 |
| hypothetical protein | DDQ68_RS19985 | Not Available | Positive | 4488240 - 4489169 | 31906.4 |
| comea family dna-binding protein | DDQ68_RS19990 | Not Available | Positive | 4489274 - 4491373 | 78084.8 |
| is5/is1182 family transposase | DDQ68_RS24885 | Not Available | Positive | 4491669 - 4491788 | 4665.56 |
| transposase | DDQ68_RS24055 | Not Available | Positive | 4492306 - 4493004 | 26609.5 |
| hypothetical protein | DDQ68_RS20005 | Not Available | Negative | 4493115 - 4493717 | 21673.3 |
| hypothetical protein | DDQ68_RS23125 | Not Available | Positive | 4494174 - 4494344 | 6076.38 |
| transposase | DDQ68_RS20010 | Not Available | Positive | 4494402 - 4495154 | 27969.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
