Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dmt family transporter | DDQ68_RS19870 | Not Available | Negative | 4466713 - 4467648 | 34291.1 |
| lptf/lptg family permease | DDQ68_RS19875 | Not Available | Negative | 4467852 - 4468931 | 40849.3 |
| trna guanosine(34) transglycosylase tgt | DDQ68_RS19880 | Not Available | Negative | 4469086 - 4470216 | 41780.4 |
| glycosyltransferase | DDQ68_RS19885 | Not Available | Positive | 4470287 - 4471435 | 42817.9 |
| rna polymerase sigma factor | DDQ68_RS19890 | Not Available | Positive | 4471426 - 4472052 | 24417.4 |
| helix-turn-helix domain-containing protein | DDQ68_RS19895 | Not Available | Negative | 4472255 - 4472494 | 8255.19 |
| duf2975 domain-containing protein | DDQ68_RS19900 | Not Available | Negative | 4472494 - 4473198 | 25912.8 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | DDQ68_RS19905 | Not Available | Positive | 4473432 - 4474061 | 23190.1 |
| yhet family hydrolase | DDQ68_RS19910 | Not Available | Negative | 4474072 - 4475058 | 36121.8 |
| 30s ribosomal protein s20 | DDQ68_RS19915 | Not Available | Positive | 4475276 - 4475533 | 9582.89 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
