Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosylcobinamide-gdp ribazoletransferase | DDQ68_RS01920 | Not Available | Positive | 460154 - 460954 | 28078.0 |
| alpha-ribazole phosphatase family protein | DDQ68_RS01925 | Not Available | Positive | 460951 - 461526 | 20680.8 |
| duf4870 domain-containing protein | DDQ68_RS01930 | Not Available | Positive | 461797 - 462153 | 12680.1 |
| s9 family peptidase | DDQ68_RS01935 | Not Available | Positive | 462375 - 464711 | 86229.7 |
| duf4136 domain-containing protein | DDQ68_RS01940 | Not Available | Negative | 465216 - 465815 | 22665.9 |
| nucleoside deaminase | DDQ68_RS01945 | Not Available | Negative | 465999 - 466460 | 17103.6 |
| pd-(d/e)xk nuclease family protein | DDQ68_RS01950 | Not Available | Negative | 466517 - 469528 | 111951.0 |
| hypothetical protein | DDQ68_RS23340 | Not Available | Positive | 469667 - 469813 | 4906.9 |
| pas domain-containing protein | DDQ68_RS01955 | Not Available | Positive | 469986 - 473786 | 138315.0 |
| response regulator | DDQ68_RS01960 | Not Available | Positive | 473810 - 474199 | 13606.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
