Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is5/is1182 family transposase | DDQ68_RS24045 | Not Available | Negative | 4421533 - 4422042 | 19199.8 |
| is630 family transposase | DDQ68_RS19670 | Not Available | Negative | 4422121 - 4422828 | 26700.2 |
| helix-turn-helix domain-containing protein | DDQ68_RS24870 | Not Available | Negative | 4422809 - 4423135 | 11490.1 |
| is1 family transposase | DDQ68_RS19680 | Not Available | Positive | 4423324 - 4423653 | 11514.8 |
| is1 family transposase | DDQ68_RS24875 | Not Available | Positive | 4423658 - 4424017 | 13781.7 |
| is5/is1182 family transposase | DDQ68_RS24880 | Not Available | Negative | 4424088 - 4424522 | 16144.4 |
| transposase family protein | DDQ68_RS19700 | Not Available | Negative | 4424797 - 4425237 | 16413.1 |
| transposase family protein | DDQ68_RS19705 | Not Available | Negative | 4425243 - 4425746 | 18781.3 |
| hypothetical protein | DDQ68_RS23565 | Not Available | Negative | 4425982 - 4426998 | 35359.9 |
| response regulator | DDQ68_RS19720 | Not Available | Negative | 4427108 - 4427518 | 15049.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
