Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DDQ68_RS19460 | Not Available | Positive | 4379132 - 4379539 | 13861.5 |
| (d)cmp kinase | DDQ68_RS19465 | Not Available | Positive | 4379572 - 4380264 | 25824.0 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | DDQ68_RS19470 | Not Available | Positive | 4380365 - 4381246 | 32418.6 |
| o-acetyl-adp-ribose deacetylase | DDQ68_RS19475 | Not Available | Negative | 4381259 - 4381807 | 19276.0 |
| hypothetical protein | DDQ68_RS24325 | Not Available | Negative | 4381835 - 4381966 | 4669.61 |
| 2tm domain-containing protein | DDQ68_RS19480 | Not Available | Positive | 4381999 - 4382283 | 10983.2 |
| atp-dependent zinc protease | DDQ68_RS19485 | Not Available | Positive | 4382436 - 4382915 | 17570.1 |
| 30s ribosomal protein s6--l-glutamate ligase | DDQ68_RS19490 | Not Available | Positive | 4383042 - 4383980 | 33203.8 |
| succinylglutamate desuccinylase/aspartoacylase family protein | DDQ68_RS19495 | Not Available | Positive | 4384004 - 4384960 | 34544.2 |
| omph family outer membrane protein | DDQ68_RS19500 | Not Available | Positive | 4385006 - 4385671 | 23860.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
